To solve the problem of low acceleration estimation accuracy in traditional single-missile observation modes against highly maneuvering targets, a novel tracking method based on distributed cooperative measurement is proposed. A multi-missile measurement scheme is established, and observability analysis identifies conditions for enhanced target state estimation. A maneuvering target tracking algorithm is then designed by integrating the Singer model with the extended Kalman filter, considering the measurement features of medium-to-high pulse repetition frequency Doppler radar seekers. Numerical simulations show that the cooperative measurement mode reduces 3D position, velocity, and acceleration errors to 1 m, 0.8 m/s, and 4 m/s², improving accuracy by 97%, 97.8%, and 84%, respectively.